According to one clever sleuth on Reddit, Agents OF SHIELD's return from winter hiatus coincides nicely with the release of Civil War:
"Assuming one episode per week, this means that CA:CW will take place chronologically between AoS season 3 episodes 19 & 20 - with three post-Civil War episodes."
So we can expect the Accords and their shockwaves to also be felt on the small screen arm of the MCU. Rating: 9/10 Count on it. Let's just hope that it isn't a George Lucas-like exercise in the mechanics of bureaucracy as minor SHIELD characters converge to draw up the Sokovia Accords. How close a cross-over remains to be seen, but it's unlikely that anyone is going to specifically find out in Civil War that Phil Coulson is alive, as a means to drive a further wedge between Cap and Tony Stark or anything.